Skills

Bash

R

Python

Genomics

Statistics

Experience

 
 
 
 
 
September 2016 – Present
University of California, Davis

Graduate student researcher

Finno Lab

Projects include:

  • Functional Annotation of Animal Genome (FAANG)

    • RNA-seq
    • ATAC-seq
    • CTCF-seq
    • CRO-seq

  • equine Neuroaxonal Dystophy (eNAD)

Recent Posts

Note: This is an update to my previous post: How to Run Snakemake pipeline on HPC. In my previous post, I disucessed some tips on how …
8 min read HPC, Workflow, Linux

For years I have been sticking with R and RStudio, primarily because RStudio’s useful and user-friendly GUI design (and my own …
5 min read Workflow

I was assisting a bioinformatics workshop for FAANG group at Plant and Animal Genome (PAG) and I ran into an interesting question with …
14 min read Linux

Why use Snakemake on HPC Snakemake is a handy workflow manager written in Python. It handles workflow based on predefined job …
10 min read Workflow

At the moment of writing this post, I’m sitting on the plane flying to Cornell. There I will learn a beautiful technique called …
3 min read Genetics
See all posts

Projects

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EzProtocol

Contact

  • 273, Vet Med 2B, University of California, CA90210, USA